[[attachment:2026 CC3D Workshop Flyer.pdf|{{attachment:2026 Twitter Banner.png|2026 Twitter Banner|width=1000}}|&do=get]] <
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'''To apply, click here''' [[https://docs.google.com/forms/d/e/1FAIpQLSe49Ux8iUUbTZgTd8rPMJGpKOgZT3VjMPKXt78pQE2IZTOa1A/viewform|CC3D 2026 Class|target=_blank]] (Click the banner above to download the class brochure.)
= CompuCell3D 21st User Training Workshop July 27th - August 9th, 2026 =
We are pleased to announce the 21st Annual Multicell Virtual-Tissue Modeling Online Summer School and Hackathon for 2026! This year's workshop will take place virtually between Monday, July 27th and Sunday, August 9th, 2026. We would very much appreciate your help in letting your colleagues and students know about this opportunity. A flyer announcing the workshop is attached below.
This year's summer workshop will focus on the basics of building virtual tissue models modeling using CompuCell3D, as well as advanced features and capabilities of the CompuCell3D software. A three-day model-building Hackathon will be hosted the weekend after the workshop, from Friday August 8th to Sunday August 10th. Workshop attendees will work in teams to build a functioning model of their problem of interest with instructor support. Workshop attendance is required for admission to the hackathon. Attendees of previous workshops may apply to attend only the hackathon. If you are already a proficient CompuCell3D user and would like to lead a project or assist with the hackathon, please contact us directly to discuss.
Summer school attendance guarantees admission to the Model-Building Hackathon. The Hackathon organizers will help group attendees by topic of interest. Experienced modelers will be embedded within each group. Workshop instructors will be available to assist Hackathon participants throughout the three-day session. Everyone will leave with a functioning core model that they can further customize.
=== Important Dates: ===
* '''July 27 – July 31:''' Multicelluar Virtual Tissue Modeling Workshop
* '''August 3 – 5:''' Advanced Topics in CompuCell3D
* '''August 7 – 9:''' CompuCell3D Model-Building Hackathon
* To get a sense for previous workshop content, you can view the entire set of !YouTube videos for the '''2025''' workshop [[https://youtube.com/playlist?list=PLmj-KAP6Sc2TFwSiY82sGQBUlA0pYAy5I&si=8nSZm-6teQdfXYpc|here]].
* Schedule of topics and events coming soon!
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== Page Index ==
* [[#Contact|Registration and Contacts]]
* [[#Pre-workshop|Pre-workshop Events]]
* [[#Python|Intro to Python Class (optional)]]
* [[#CC3D|Tissue Modeling with CompuCell3D]]
* [[#Hack|Model-Building Hackathon]]
* [[#Announcement|Class Announcement, fliers, etc.]]
* [[#RelatedWorkshops|Related Workshops]]
* [[#Support|Supported by]]
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== Registration and Contacts: ==
'''Registration for the 2026 CompuCell3D Summer Workshop is now open at: [[https://tinyurl.com/CC3D2026]] '''
Please apply by June 1st, 2026 for full consideration.
'''Please make sure that the email address compucell3d.iu@gmail.com is on your whitelist so it doesn't get marked as spam!'''
If you have any questions please contact
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[[https:\\compucell3d.org|CompuCell3D.org]].<
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You can also follow us on twitter @CompuCell3D.
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=== Pre-workshop Events: ===
A virtual orientation session will be posted to YouTube and shared to attendees in advance of the workshop. The orientation will include a number of important links, a step-by-step tutorial on using CompuCell3D, as well as a preliminary course schedule. Please contact us as soon as possible if you have any trouble accessing the video, or if you have any questions about the material discussed in the orientation.
* '''Orientation Video Link: Coming Soon'''
Two CompuCell3D installation help sessions will also be held in advance of the workshop. '''This year's workshop will be taught using only local installations of CompuCell3D. It is important that you get CompuCell3D installed successfully on your personal computer before the workshop begins.''' There will not be time during the workshop modules to assist with installation issues. If you are having trouble installing CompuCell3D and you are not able to attend one of the sessions listed below, please contact us as soon as possible to set up an appointment to get help with your installation.
* '''Installation Help Session 1: TBA '''
* '''Installation Help Session 2: TBA '''
At least one hackathon discussion and teaming meeting will be held in advance of the workshop (dates TBD). If you are planning to attend the hackathon, these meetings will be a good way to start thinking of a topic and find potential teammates with similar interests.
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== Intro to Python: ==
'''Date TBA'''
We will have a one-day Python training class on Saturday, July 19th. This class is optional and meant as an introduction and refresher course for programming in Python. if you are comfortable using Python this can be skipped. <
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The meeting will be held via Zoom. More details coming soon
* [[attachment:python_cheat_sheet_py3.pdf| Python Cheat Sheet |&do=get]]
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== Tissue Modeling with CompuCell3D: ==
'''July 27th - Aug 5th, 2026''' <
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The Workshop will be held via Zoom. Meeting links will be sent in advance of the workshop. Tentative schedules for the basic and advanced sessions can be found below. Times and topics for each module are subject to change.
'''Week 1: Basic CompuCell3D (July 27 – 31)'''
{{attachment:scheduleTable_week1_2026.png}}
'''Week 2: Advanced Topics (Aug 3 – 5)'''
''Schedule Coming Soon!''
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== Model-Building Hackathon: ==
'''August 7th - 9th, 2026''' <
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The hackathon will be held via Zoom. More details coming soon.
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== Class Announcement, flyers, etc.: ==
(click to download)<
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[[attachment:2026 CC3D Workshop Flyer.pdf|{{attachment:2026 CC3D Workshop Flyer.png|2026 Flyer|width=400}}|&do=get]]
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=== Related workshops to consider: ===
Network Modeling Virtual Summer School & Symposium, remote and at University of Washington: Date TBA
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== Supported by: ==
The National Science Foundation (NSF 2303695)